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GSLS Bioinformatics Training 2014

Programme of events provided by Graduate School of Life Sciences
(Tue 7 Jan 2014 - Fri 19 Dec 2014)

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Tue 29 Apr 2014 – Fri 18 Jul 2014

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April 2014

Tue 29
Bioinformatics: An Introduction to Solving Biological Problems with R (2 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available here.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register Interest by linking here.

May 2014

Thu 1
Bioinformatics: An Introduction to Solving Biological Problems with PERL new (1 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course is aimed at those new to programming and provides an introduction to programming using Perl. By the end of this course, attendees should be able to write simple Perl programs and to understand more complex Perl programs written by others. The course will be taught using the online Learning Perl materials created by Sofia Robb of the University of California Riverside. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Fri 2
Bioinformatics: An Introduction to Solving Biological Problems with PERL new (2 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course is aimed at those new to programming and provides an introduction to programming using Perl. By the end of this course, attendees should be able to write simple Perl programs and to understand more complex Perl programs written by others. The course will be taught using the online Learning Perl materials created by Sofia Robb of the University of California Riverside. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Thu 22
Bioinformatics: An Introduction to Solving Biological Problems with Python new (1 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course provides a gentle and practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs from scratch and to customize more complex code to fit their needs. Further information is available here.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Fri 23
Bioinformatics: An Introduction to Solving Biological Problems with Python new (2 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course provides a gentle and practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs from scratch and to customize more complex code to fit their needs. Further information is available here.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

June 2014

Mon 2
Bioinformatics: An Introduction to Solving Biological Problems with Python new (1 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course provides a gentle and practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs from scratch and to customize more complex code to fit their needs. Further information is available here.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Tue 3
Bioinformatics: An Introduction to Solving Biological Problems with Python new (2 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course provides a gentle and practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs from scratch and to customize more complex code to fit their needs. Further information is available here.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Thu 5
Bioinformatics: An Introduction to MATLAB new (1 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

A two-day course designed to introduce MATLAB and some basic programming concepts. Further information is available here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to Book or register Interest by linking here.

Fri 6
Bioinformatics: An Introduction to MATLAB new (2 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

A two-day course designed to introduce MATLAB and some basic programming concepts. Further information is available here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to Book or register Interest by linking here.

Mon 9
Bioinformatics: Whole Exome Sequencing and RNA-sequence data analysis new (1 of 3) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course covers state-of-the-art tools and methods for NGS RNA-seq and exome variant data analysis, which are of major relevance in today's genomic and gene expression studies. Further information is available here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Tue 10
Bioinformatics: Whole Exome Sequencing and RNA-sequence data analysis new (2 of 3) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course covers state-of-the-art tools and methods for NGS RNA-seq and exome variant data analysis, which are of major relevance in today's genomic and gene expression studies. Further information is available here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Wed 11
Bioinformatics: Whole Exome Sequencing and RNA-sequence data analysis new (3 of 3) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course covers state-of-the-art tools and methods for NGS RNA-seq and exome variant data analysis, which are of major relevance in today's genomic and gene expression studies. Further information is available here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Thu 12
Bioinformatics: Introduction to Next Generation Sequencing (1 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

The aim of this course is to provide hands-on experience in analysing NGS data, including:

  • Knowledge of the various sequencing technologies, data formats and analysis workflows commonly used in "'NGS'" analysis workflows
  • Hands-on experience with common analytical workflows for ChIP-seq, RNASeq data and analysis of Genome Variation using computer exercises.
  • An overview of available tools and discussion of their limitations.

Further information is available here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to Book or register Interest by linking here.

Fri 13
Bioinformatics: Introduction to Next Generation Sequencing (2 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

The aim of this course is to provide hands-on experience in analysing NGS data, including:

  • Knowledge of the various sequencing technologies, data formats and analysis workflows commonly used in "'NGS'" analysis workflows
  • Hands-on experience with common analytical workflows for ChIP-seq, RNASeq data and analysis of Genome Variation using computer exercises.
  • An overview of available tools and discussion of their limitations.

Further information is available here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to Book or register Interest by linking here.

Mon 16
Bioinformatics: An Introduction to Solving Biological Problems with R (1 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available here.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register Interest by linking here.

Tue 17
Bioinformatics: An Introduction to Solving Biological Problems with R (2 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available here.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register Interest by linking here.

Wed 18
Bioinformatics: Using the Ensembl Genome Browser Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

The Ensembl project provides a comprehensive and integrated source of annotation of, mainly vertebrate, genome sequences. This one-day workshop offers a comprehensive practical introduction to the use of the Ensembl genome browser as well as essential background information. Further information is available here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to Book or register Interest by linking here.

July 2014

Tue 8
Bioinformatics: An Introduction to Solving Biological Problems with PERL new (1 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course is aimed at those new to programming and provides an introduction to programming using Perl. By the end of this course, attendees should be able to write simple Perl programs and to understand more complex Perl programs written by others. The course will be taught using the online Learning Perl materials created by Sofia Robb of the University of California Riverside. Further information is available.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Wed 9
Bioinformatics: An Introduction to Solving Biological Problems with PERL new (2 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course is aimed at those new to programming and provides an introduction to programming using Perl. By the end of this course, attendees should be able to write simple Perl programs and to understand more complex Perl programs written by others. The course will be taught using the online Learning Perl materials created by Sofia Robb of the University of California Riverside. Further information is available.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Fri 11
Bioinformatics: Analysing mapped NGS data with SeqMonk Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

SeqMonk is a graphical program for the visualisation and analysis of large mapped datasets such as ChIP-Seq, RNA-Seq, and BS-Seq. Further information is available here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Mon 14
Bioinformatics: An Introduction to Solving Biological Problems with Python new (1 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course provides a gentle and practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs from scratch and to customize more complex code to fit their needs. Further information is available here.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Tue 15
Bioinformatics: An Introduction to Solving Biological Problems with Python new (2 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course provides a gentle and practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs from scratch and to customize more complex code to fit their needs. Further information is available here.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Wed 16
Bioinformatics: Introduction to Metabolomics Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

The aim of this course is to provide an overview of the applications, laboratory equipment and online bioinformatic portals for metabolomics research. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.

Thu 17
Bioinformatics: An Introduction to Solving Biological Problems with R (1 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available here.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register Interest by linking here.

Fri 18
Bioinformatics: An Introduction to Solving Biological Problems with R (2 of 2) Finished 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building

This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available here.

The Course Web Site providing links to the course materials is here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register Interest by linking here.