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Department of Chemistry

Department of Chemistry course timetable

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Fri 12 Oct 2018 – Fri 30 Nov 2018

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October 2018

Fri 12
IS1 Chemistry Library Orientation Finished 10:15 - 10:45 Library

This is a compulsory session which introduces new graduate students to the Department of Chemistry Library and its place within the wider Cambridge University Library system. It provides general information on what is available, where it is, and how to get it. Print and online resources are included.

You must choose one session out of the 9 sessions available.

CT2 Fundamentals of Mass Spectrometry (2 of 2) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

Mass spectrometry is one of the main analytical-chemical techniques used to characterise organic compounds and their elemental composition. This overview will discuss some of the most frequently used mass spectrometry techniques and their specific strengths (e.g., quadrupole, time-of-flight and high-resolution MS), as well as ionisation techniques such as electron ionisation (EI), electrospray ionisation (ESI), matrix assisted laser desorption/ionisation (MALDI) and MS techniques to quantify metal concentrations (e.g. inductively coupled plasma MS, ICP-MS) and isotope ratios.

Mon 15

This session is compulsory for all experimentalists to attend and will provide useful information regarding analytical facilities at this Department including NMR, mass spectrometry and X-ray crystallography. Short descriptions will be given of all available instruments, together with a tour to show participants where these instruments are located, as well as explain the procedures for preparing/submitting samples for the analysis will also be discussed.

Tue 16

This session introduces new undergraduate Chemistry students to the Department of Chemistry Library and its place within the wider Cambridge University Library system. It provides general information on what is available, where it is, and how to get it. Print and online resources are included.

Wed 17
CT3 Mass Spectrometry in Structural Biology and Biophysics (1 of 2) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

During the last decade, mass spectrometry (MS) has become an indispensable tool in experimental biophysics, capable of providing unique information on the conformation and dynamics of biomolecules, as well as their interactions with physiological partners. In this short course, the current state of biophysical MS will be presented, with emphasis on experimental techniques that are used to study protein higher order structure and dynamics. Biophysical methods that use MS are native MS, tandem MS (MS/MS), liquid chromatography MS (LC-MS), hydrogen-deuterium exchange MS (HDX-MS), chemical cross-linking MS (CXL-MS) and ion mobility MS (IM-MS).

This session introduces new undergraduate Chemistry students to the Department of Chemistry Library and its place within the wider Cambridge University Library system. It provides general information on what is available, where it is, and how to get it. Print and online resources are included.

Thu 18

This session introduces new undergraduate Chemistry students to the Department of Chemistry Library and its place within the wider Cambridge University Library system. It provides general information on what is available, where it is, and how to get it. Print and online resources are included.

Fri 19
CT3 Mass Spectrometry in Structural Biology and Biophysics (2 of 2) Finished 13:00 - 14:00 U203

During the last decade, mass spectrometry (MS) has become an indispensable tool in experimental biophysics, capable of providing unique information on the conformation and dynamics of biomolecules, as well as their interactions with physiological partners. In this short course, the current state of biophysical MS will be presented, with emphasis on experimental techniques that are used to study protein higher order structure and dynamics. Biophysical methods that use MS are native MS, tandem MS (MS/MS), liquid chromatography MS (LC-MS), hydrogen-deuterium exchange MS (HDX-MS), chemical cross-linking MS (CXL-MS) and ion mobility MS (IM-MS).

Mon 22
CT4 Solution Phase NMR Spectroscopy (1 of 3) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

Nuclear Magnetic Resonance (NMR) spectroscopy represents one of the most informative and widely used techniques for characterisation of compounds in the solution and solid state. Most researchers barely tap into the potential of the experiments that are available on the instruments in the Department, so in this short course we will explore the basic concepts that will allow you to make the most of these powerful techniques for routine analysis, as well as introducing more specialised experiments.

Tue 23

This session introduces new undergraduate Chemistry students to the Department of Chemistry Library and its place within the wider Cambridge University Library system. It provides general information on what is available, where it is, and how to get it. Print and online resources are included.

Wed 24
CT4 Solution Phase NMR Spectroscopy (2 of 3) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

Nuclear Magnetic Resonance (NMR) spectroscopy represents one of the most informative and widely used techniques for characterisation of compounds in the solution and solid state. Most researchers barely tap into the potential of the experiments that are available on the instruments in the Department, so in this short course we will explore the basic concepts that will allow you to make the most of these powerful techniques for routine analysis, as well as introducing more specialised experiments.

This session introduces new undergraduate Chemistry students to the Department of Chemistry Library and its place within the wider Cambridge University Library system. It provides general information on what is available, where it is, and how to get it. Print and online resources are included.

Fri 26
CT4 Solution Phase NMR Spectroscopy (3 of 3) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

Nuclear Magnetic Resonance (NMR) spectroscopy represents one of the most informative and widely used techniques for characterisation of compounds in the solution and solid state. Most researchers barely tap into the potential of the experiments that are available on the instruments in the Department, so in this short course we will explore the basic concepts that will allow you to make the most of these powerful techniques for routine analysis, as well as introducing more specialised experiments.

Mon 29
CT5 An Introduction to NMR Processing with TopSpin new Finished 12:30 - 14:00 Department of Chemistry, Unilever Lecture Theatre

The aim of the session is:

  • to provide you with basic abilities to use TopSpin
  • Extract information from the NMR data, giving you knowledge about the sample.
  • Produce spectra to include in reports.

The session will also give an insight into some of the more advanced features of the software, and how to optimise your workflow.

November 2018

Wed 7
CT6 Solid State NMR Spectroscopy (1 of 2) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

The aim of this course is to provide an idea of what kind of scientific problems can be solved by solid state NMR. It will cover how NMR can be used to study molecular structure, nanostructure and dynamics in the solid state, including heterogeneous solids, such as polymers, MOFs, energy-storage and biological materials. No previous knowledge of solid state NMR will be required, just a basic working knowledge of solution-state NMR for 1H and 13C, i.e. undergraduate level NMR. In order to highlight the utility of this technique, some materials based research using solid state NMR will also be covered.

Fri 9
CT6 Solid State NMR Spectroscopy (2 of 2) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

The aim of this course is to provide an idea of what kind of scientific problems can be solved by solid state NMR. It will cover how NMR can be used to study molecular structure, nanostructure and dynamics in the solid state, including heterogeneous solids, such as polymers, MOFs, energy-storage and biological materials. No previous knowledge of solid state NMR will be required, just a basic working knowledge of solution-state NMR for 1H and 13C, i.e. undergraduate level NMR. In order to highlight the utility of this technique, some materials based research using solid state NMR will also be covered.

Wed 14
CT9 Atomic Force Microscopy (1 of 2) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

Probe microscopy is a general term for a class of microscopy in which well-defined nanoscale probes are used to interact with a sample in some manner. In this introductory lecture the necessary background principles to understand probe microscopy are explained with reference to Scanning Tunnelling Microscopy and Atomic Force Microscopy in both tapping and contact mode. This will provide the user with the necessary background to make the most of the increasingly well-used Departmental Keysight 5500 multimode system, which is operated and maintained by the Melville Lab. Probe microscopy is of interest to anyone with a need to perform single molecule or surface based studies. Typically anything involving a surface interaction is accessible and the technique is particularly well suited to studying a variety of chemical and electromechanical properties of aggregates with 1-1000 nm dimensions. Recently, the system has been used to study cellulose crystals, amyloid fibres, protein monolayers, thermal properties of polymer films, doped graphite and so on.

Other modes are available on the Keysight system such as pico-trec, electrochemical STM, EFM, KFM, MFM, and LFM and these modes will be described but not explained in detail during the lecture.

Thu 15
CT7 X-Ray Crystallography (1 of 3) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

These lectures will introduce the basics of crystallography and diffraction, assuming no prior knowledge. The aim is to provide an overview that will inspire and serve as a basis for researchers to use the Department’s single-crystal and/or powder X-ray diffraction facilities or to appreciate more effectively results obtained through the Department’s crystallographic services. The final lecture will be devoted to searching and visualising crystallographic data using the Cambridge Structural Database system.

Fri 23
CT7 X-Ray Crystallography (2 of 3) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

These lectures will introduce the basics of crystallography and diffraction, assuming no prior knowledge. The aim is to provide an overview that will inspire and serve as a basis for researchers to use the Department’s single-crystal and/or powder X-ray diffraction facilities or to appreciate more effectively results obtained through the Department’s crystallographic services. The final lecture will be devoted to searching and visualising crystallographic data using the Cambridge Structural Database system.

Mon 26
CT7 X-Ray Crystallography (3 of 3) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

These lectures will introduce the basics of crystallography and diffraction, assuming no prior knowledge. The aim is to provide an overview that will inspire and serve as a basis for researchers to use the Department’s single-crystal and/or powder X-ray diffraction facilities or to appreciate more effectively results obtained through the Department’s crystallographic services. The final lecture will be devoted to searching and visualising crystallographic data using the Cambridge Structural Database system.

CT9 Atomic Force Microscopy (2 of 2) Finished 14:30 - 15:30 Department of Chemistry, Unilever Lecture Theatre

Probe microscopy is a general term for a class of microscopy in which well-defined nanoscale probes are used to interact with a sample in some manner. In this introductory lecture the necessary background principles to understand probe microscopy are explained with reference to Scanning Tunnelling Microscopy and Atomic Force Microscopy in both tapping and contact mode. This will provide the user with the necessary background to make the most of the increasingly well-used Departmental Keysight 5500 multimode system, which is operated and maintained by the Melville Lab. Probe microscopy is of interest to anyone with a need to perform single molecule or surface based studies. Typically anything involving a surface interaction is accessible and the technique is particularly well suited to studying a variety of chemical and electromechanical properties of aggregates with 1-1000 nm dimensions. Recently, the system has been used to study cellulose crystals, amyloid fibres, protein monolayers, thermal properties of polymer films, doped graphite and so on.

Other modes are available on the Keysight system such as pico-trec, electrochemical STM, EFM, KFM, MFM, and LFM and these modes will be described but not explained in detail during the lecture.

Tue 27
IS3 Research Information Skills for Graduate Students Finished 09:00 - 11:00 Unilever Lecture Theatre

This compulsory course will equip you with the skills required to manage the research information you will need to gather throughout your graduate course, as well as the publications you will produce yourself. It will also help you enhance your online research profile and measure the impact of research.

A short break for refreshments will be included

Wed 28
CT8 Electron Microscopy (1 of 2) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

The first session will describe the basics of electron diffraction and the main differences from X-ray and neutron diffraction, particularly as regards the strength of the interaction and the complications caused by multiple scattering. The advantages of the method in determining unit cell dimensions will also be discussed.

Session two will concentrate on the advantages conferred by forming images with electrons but also on the inherent problems such as the effect of aberrations on the ultimate resolution. If there is sufficient time, a consideration of the information available in high resolution images will be made.

Thu 29
IS4 Research Data Management for Graduate Students Finished 09:00 - 11:00 Chemistry of Health

This compulsory session introduces Research Data Management (RDM) to Chemistry PhD students. It is highly interactive and utilises practical activities throughout.

Key topics covered are:

  • Research Data Management (RDM) - what it is and what problems can occur with managing and sharing your data.
  • Data backup and file sharing - possible consequences of not backing up your data, strategies for backing up your data and sharing your data safely.
  • Data organisation - how to organise your files and folders, what is best practice.
  • Data sharing - obstacles to sharing your data, benefits and importance of sharing your data, the funder policy landscape, resources available in the University to help you share your data.
  • Data management planning - creating a roadmap for how not to get lost in your data!

Lunch and refreshments are included for this course

Fri 30
CT8 Electron Microscopy (2 of 2) Finished 13:00 - 14:00 Department of Chemistry, Unilever Lecture Theatre

The first session will describe the basics of electron diffraction and the main differences from X-ray and neutron diffraction, particularly as regards the strength of the interaction and the complications caused by multiple scattering. The advantages of the method in determining unit cell dimensions will also be discussed.

Session two will concentrate on the advantages conferred by forming images with electrons but also on the inherent problems such as the effect of aberrations on the ultimate resolution. If there is sufficient time, a consideration of the information available in high resolution images will be made.